DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and napsa

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001005701.1 Gene:napsa / 448214 XenbaseID:XB-GENE-947098 Length:402 Species:Xenopus tropicalis


Alignment Length:400 Identity:159/400 - (39%)
Similarity:228/400 - (56%) Gaps:30/400 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDF--VQQKYNRQYTANGYPMEH 68
            :|..:|:..|:|...:|   |.|||::|.|:.:|:..:.:.:.:|  ..:::.:|.|.    .|.
 Frog     1 MKPNIFILLLLVWTTDA---LIRIPLKKFPSIRRTLSDSMTKEEFNGATKEFLKQQTI----PEK 58

  Fly    69 LSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSC--ISTACQDHQVFYKNKSSTYVANG 131
            |:||.:.||||.|.||||.|.|.|.|||||||||||...|  ...||..|:.:....||||..|.
 Frog    59 LTNYLDAQYYGEIFIGTPPQKFAVIFDTGSSNLWVPSIKCSFFDFACWLHKKYRSKDSSTYQQNN 123

  Fly   132 TAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGV 196
            |.|:|.|||||:||:||.|.|....:.:.:|||.|...:.|..||.|:||||||||:|:::||||
 Frog   124 TEFAIQYGTGSLSGFLSQDTVTVGSIDVANQTFAEAVKQPGIVFVFAHFDGILGMGYPNISVDGV 188

  Fly   197 TPTFQNMMQQGLVQSPVFSFFL-RDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQT 260
            .|.|.|||:|.|::..||||:| ||  .:...||||:|||:||:.|:|...|:||.:.|||:.:.
 Frog   189 VPVFDNMMEQKLLEENVFSFYLSRD--PMAMVGGELVLGGTDPNYYTGDFHYLNVTRMAYWQIKA 251

  Fly   261 DYIKVGSTSI--STFAQAIADTGTSLIIAPQAQYDQISQLFNA----NSEGLFECSS-TSYPDLI 318
            |.::|.:..:  ....|||.|||||||..|:.:...:.:...|    :.|....|.. .|.|.:.
 Frog   252 DEVRVANQLVLCKGGCQAIVDTGTSLITGPREEIRALHKAIGAFPLFSGEYFVNCKRIQSLPTVS 316

  Fly   319 ININGVDFKIPAKYYIIEEEDF----C-----SLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRL 374
            ..:.||.:.:..:.|:::...|    |     .|.|:......||:||||:|:.||.||..|.|:
 Frog   317 FILGGVAYNLTGEQYVLKISKFGHTLCLSGFMGLDIRPPAGPLWILGDVFIGQYYTVFDRDNDRV 381

  Fly   375 GFAPVNSAVG 384
            |||......|
 Frog   382 GFATAKQVKG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 142/329 (43%)
Asp 76..379 CDD:278455 139/321 (43%)
napsaNP_001005701.1 A1_Propeptide 18..42 CDD:369623 7/23 (30%)
pepsin_retropepsin_like 61..384 CDD:386101 139/324 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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