DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and CG5863

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster


Alignment Length:381 Identity:167/381 - (43%)
Similarity:224/381 - (58%) Gaps:18/381 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYN----RQYTA-NGYPMEHLSNYDN 74
            |.:...:....|.|||:|...:|..|.:...|.|..:..|||    ::.|: ||...|.|.|..|
  Fly    14 LCLFWAKCQGQLIRIPMQFQASFMASRRQHRAGRSSLLAKYNVVGGQEVTSRNGGATETLDNRLN 78

  Fly    75 FQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCI--STACQDHQVFYKNKSSTYVANGTAFSIT 137
            .:|.|.||||:|||.|.:.|||||:|||||.:.|.  |.||..|..:..:.|||:|.:|..|||.
  Fly    79 LEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNASASSTFVPDGRRFSIA 143

  Fly   138 YGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTFQN 202
            |||||:||.|:.|.|....|.:|:||||..|.|.|..|||..|.||:|:||..:|..|:.|.|::
  Fly   144 YGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIVGLGFRPIAELGIKPLFES 208

  Fly   203 MMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIKVGS 267
            |..|.||...||||:|:.|||.. .||||:.||.|.:.:|||||||.:..|.||:|..|.|:|..
  Fly   209 MCDQQLVDECVFSFYLKRNGSER-KGGELLFGGVDKTKFSGSLTYVPLTHAGYWQFPLDVIEVAG 272

  Fly   268 TSISTFAQAIADTGTSLIIAPQAQYDQISQLF----NANSEGLFECSS-TSYPDLIININGVDFK 327
            |.|:...||||||||||:.||..:|..|:.|.    .:|:|.|..||. .|.|:::..|.|..|.
  Fly   273 TRINQNRQAIADTGTSLLAAPPREYLIINSLLGGLPTSNNEYLLNCSEIDSLPEIVFIIGGQRFG 337

  Fly   328 IPAKYYII-----EEEDFCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFAP 378
            :..:.|::     :....|..|...::.:|||:||||:||.||.||.|.:|:||||
  Fly   338 LQPRDYVMSATNDDGSSICLSAFTLMDAEFWILGDVFIGRYYTAFDAGQRRIGFAP 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 149/322 (46%)
Asp 76..379 CDD:278455 147/315 (47%)
CG5863NP_650623.1 pepsin_retropepsin_like 71..392 CDD:299705 148/321 (46%)
Asp 80..394 CDD:278455 147/315 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439939
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I2599
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1456
98.900

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