DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and CG10104

DIOPT Version :10

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_610961.1 Gene:CG10104 / 36602 FlyBaseID:FBgn0033933 Length:404 Species:Drosophila melanogaster


Alignment Length:383 Identity:143/383 - (37%)
Similarity:209/383 - (54%) Gaps:33/383 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYT------ANGYPMEHLSNYDNFQYYGNISIG 84
            |.|:|:::.|:.:...:.:....|.::.||..:.:      .:......||||.:.||:|.|:||
  Fly    28 LYRVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNSAVKSTPLSNYLDAQYFGPITIG 92

  Fly    85 TPGQDFLVQFDTGSSNLWVPGSSCIST--ACQDHQVFYKNKSSTYVANGTAFSITYGTGSVSGYL 147
            ||.|.|.|.|||||||||||.::|.||  ||:.|..::..:|:::...|..|:|.||:||:||:|
  Fly    93 TPPQTFKVIFDTGSSNLWVPSATCASTMVACRVHNRYFAKRSTSHQVRGDHFAIHYGSGSLSGFL 157

  Fly   148 SVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTFQNMMQQGLVQSP 212
            |.|.|..|||.|:.|||.|.|...|..|:.|.||||.|:.:.|:::..:.|.|..||:|||:..|
  Fly   158 STDTVRVAGLEIRDQTFAEATEMPGPIFLAAKFDGIFGLAYRSISMQRIKPPFYAMMEQGLLTKP 222

  Fly   213 VFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIKVGSTSI-STFAQA 276
            :||.:|..||...  ||.:..|||:|..|:|:.|||.|...|||:.:.|...:.:..: ....:.
  Fly   223 IFSVYLSRNGEKD--GGAIFFGGSNPHYYTGNFTYVQVSHRAYWQVKMDSAVIRNLELCQQGCEV 285

  Fly   277 IADTGTSLIIAPQAQYDQISQLFNANSEG--------LFECSST-SYPDLIININGVDFKIPAKY 332
            |.|||||.:..|   ||| :.|.|.:..|        |..|.|. ..|.:...:.|..|.:.:..
  Fly   286 IIDTGTSFLALP---YDQ-AILINESIGGTPSSFGQFLVPCDSVPDLPKITFTLGGRRFFLESHE 346

  Fly   333 Y----IIEEEDFCSLA-----IQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFAPVNS 381
            |    |.::...||.|     :.|.:...||:||||||:.|||||:...|:|||...|
  Fly   347 YVFRDIYQDRRICSSAFIAVDLPSPSGPLWILGDVFLGKYYTEFDMERHRIGFADARS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 Asp 76..379 CDD:394983 131/323 (41%)
CG10104NP_610961.1 pepsin_retropepsin_like 76..400 CDD:472175 133/329 (40%)

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