DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and CG17134

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster


Alignment Length:384 Identity:183/384 - (47%)
Similarity:245/384 - (63%) Gaps:21/384 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LIVLVGEANST--LRRIPIQKSPNFKRSHKNIVAERDFVQQKY------NRQYTANGYPMEHLSN 71
            |:||||..:|.  |.|:.:|.:.||.::|.::.||:..:..||      :...:::| ..|:|.|
  Fly     7 LLVLVGIGHSAAKLNRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSG-ATENLHN 70

  Fly    72 YDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSC--ISTACQDHQVFYKNKSSTYVANGTAF 134
            ..|.:|||.|:||||.|.|.:.|||||:|||||.:||  .:||||.|..:..:.||||||||..|
  Fly    71 SMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVANGEEF 135

  Fly   135 SITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPT 199
            :|.|||||:||:||.|.|..||::||:|||||..:|.||.||||.|.||||:.|.::|||||||.
  Fly   136 AIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDGVTPP 200

  Fly   200 FQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIK 264
            |.||:.|||:..||.||:|:..|:.. .||||||||.|.|||.||||||.|...|||:|:.:.||
  Fly   201 FDNMISQGLLDEPVISFYLKRQGTAV-RGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVNTIK 264

  Fly   265 VGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA---NSEGLFECSS-TSYPDLIININGVD 325
            ...|.:....|||||||||||..|.|.|.:|::...|   :.|....|.. :|.|.:.:||.|..
  Fly   265 TNGTLLCNGCQAIADTGTSLIAVPLAAYRKINRQLGATDNDGEAFVRCGRVSSLPKVNLNIGGTV 329

  Fly   326 FKIPAKYYIIE----EEDFCSLAIQSI-NQDFWIMGDVFLGRIYTEFDVGNQRLGFAPV 379
            |.:..:.||::    .:.:|..|...: ...|||:||||:|:.||.||.||:|:|||.|
  Fly   330 FTLAPRDYIVKVTQNGQTYCMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFARV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 164/321 (51%)
Asp 76..379 CDD:278455 161/313 (51%)
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:299705 161/316 (51%)
Asp 75..388 CDD:278455 161/313 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455544
Domainoid 1 1.000 297 1.000 Domainoid score I1463
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2536
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1456
98.900

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