DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and sxa1

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001342952.1 Gene:sxa1 / 3361468 PomBaseID:SPAC26A3.01 Length:533 Species:Schizosaccharomyces pombe


Alignment Length:445 Identity:103/445 - (23%)
Similarity:183/445 - (41%) Gaps:91/445 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTAN-----GYPMEHLSN 71
            ::.|..|.....|....:|.::|......|    ::.|.|.:|..|....|     |||:..|..
pombe    10 ISALQALQASVASAYSEVPGKRSVVLNLQH----SQYDHVARKLERTKVLNKRDSSGYPVLDLEY 70

  Fly    72 YDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPG------------------------SSCISTA 112
            .|...|:.|:::|:..:.:.:..||||...||..                        |...:.|
pombe    71 TDAGGYFANLTLGSNERVYSLTLDTGSPYTWVTAKNITALSASEIWSDTDGVDAGRSTSDIRTNA 135

  Fly   113 CQDHQVF-YKNKSSTYVANGT-AFSITYGTG-SVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTN 174
            |.::..| |.:.::....:.| .|..:||.. :|.||..||...|||||:....||..|.|..::
pombe   136 CTNYTCFDYSSTTARRTNSSTIGFLASYGDNTTVLGYNMVDNAYFAGLTLPGFEFGLATREYDSS 200

  Fly   175 FVDAYFDGILGMGFPSLAVDGVT----------PTF-QNMMQQGLVQSPVFSFFLRDNGSVTFYG 228
            .: :...||:|:.. ::.:.|::          ||. ..::...::.:|.|..:|.::      .
pombe   201 QI-SVTPGIIGLSV-AMTITGISSDDKVVAFTPPTIVDQLVSANVIDTPAFGIYLNED------V 257

  Fly   229 GELILGGSDPSLYSGSLTYVNVV---QAAYWKFQTDYIKVGSTSISTFAQA-------------- 276
            ||||.||.|.:..:||:.:||:.   .:.::....:.|.|.:::.|...|:              
pombe   258 GELIFGGYDKAKINGSVHWVNISSSDDSTFYSVNLESITVTNSTSSNNVQSSKRSSKDIEVNTTV 322

  Fly   277 IADTGTSLIIAPQAQYDQISQLFNANSEGLFE--------CSSTSYPDLI-INI-NGVDFKIPAK 331
            ..||||..|..|:...:.|:..:    :|:..        |.|.|..|.| .|. :..||.:...
pombe   323 TLDTGTVYIYLPEDTVESIADQY----QGIVSEYGYVVIYCDSFSDSDYISFNFGSDADFHVSVN 383

  Fly   332 YYIIEEE-----DFCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFAPVNS 381
            ..:|..:     |.|.||:...:...:::|..||..:|:.:|...|::|.|.:||
pombe   384 DLVIYRQESTSGDICYLALFEGDTSSYLLGQYFLQYVYSIYDWDAQKIGLAALNS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 86/380 (23%)
Asp 76..379 CDD:278455 85/372 (23%)
sxa1NP_001342952.1 Asp 75..436 CDD:306525 85/372 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
66.010

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