DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and CG31928

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001259869.1 Gene:CG31928 / 326175 FlyBaseID:FBgn0051928 Length:418 Species:Drosophila melanogaster


Alignment Length:335 Identity:117/335 - (34%)
Similarity:174/335 - (51%) Gaps:23/335 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EHLSNYDNFQYYGNISIGTP-GQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYVAN 130
            |:|.|..|.:||.....||| .|...:..||.|:||.|..|..:..:|..|..:..::|.||.||
  Fly    82 ENLINSHNTEYYVTAGFGTPKSQPVTLLVDTASANLLVYSSEFVKQSCLHHDGYNSSESQTYQAN 146

  Fly   131 GTAFSITYGTGSV-SGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVD 194
            |:.|.|.:.:..: :|.||.|......|.|::|||.|:.:........:.||||:|:||..:|::
  Fly   147 GSPFQIQFASQEILTGILSTDTFTLGDLVIKNQTFAEINSAPTDMCKRSNFDGIIGLGFSEIALN 211

  Fly   195 GVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQ 259
            ||.....|:::|||:..|:||.::..|.|....||.|:||||||:||||.||||.|.:..:|:..
  Fly   212 GVETPLDNILEQGLIDEPIFSLYVNRNASDASNGGVLLLGGSDPTLYSGCLTYVPVSKVGFWQIT 276

  Fly   260 TDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA----NSEGLF--ECSSTSY-PDL 317
            ...:::||..:.:..|||.|.||||||.|......|::....    ..:|::  :|...|: |.:
  Fly   277 VGQVEIGSKKLCSNCQAIFDMGTSLIIVPCPALKIINKKLGIKETDRKDGVYIIDCKKVSHLPKI 341

  Fly   318 IININGVDFKIPAKYYIIEEEDFCSLAIQSI--------NQD------FWIMGDVFLGRIYTEFD 368
            :.||...||.:....||:.....|.....|:        |.|      .|:.||||.|.|:|.||
  Fly   342 VFNIGWKDFTLNPSDYILNYSGTCVSGFSSLSDCNGTQTNDDSEDLNNIWVFGDVFFGAIFTLFD 406

  Fly   369 VGNQRLGFAP 378
            .|.:.:|.||
  Fly   407 FGLKLVGMAP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 115/333 (35%)
Asp 76..379 CDD:278455 113/326 (35%)
CG31928NP_001259869.1 pepsin_retropepsin_like 84..416 CDD:299705 114/331 (34%)
Asp 91..416 CDD:278455 111/324 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439962
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.910

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