DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and CG31926

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001259870.1 Gene:CG31926 / 326174 FlyBaseID:FBgn0051926 Length:410 Species:Drosophila melanogaster


Alignment Length:396 Identity:148/396 - (37%)
Similarity:207/396 - (52%) Gaps:26/396 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFLAGLIVLVGEANSTLR-RIPIQKSP-----NFKRSHKNIVAER----DFVQQKYNRQYTANG 63
            |.:|..|.||..||.:..| ||.:.|:|     |.|...|.:..:.    |..:.|........|
  Fly    12 LFWLTVLAVLAFEAEARKRVRIGLHKNPEPIEENIKNELKTLSIKHNLNVDDTKAKTKTDTKVPG 76

  Fly    64 YPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTA--CQDHQVFYKNKSST 126
            ..:..|.|..|.:||..:..|.|.||..|..||||:||||..|.|..:.  |.:...:..:.|:|
  Fly    77 SKVATLENLYNTEYYTTLGFGNPPQDLKVLIDTGSANLWVLSSKCPDSVAPCANRIKYNSSASTT 141

  Fly   127 YVANGTAFSITYGTGS------VSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILG 185
            |.|..|||:|.||:.|      :||:.|.|.|.|||.:|::|.|.|:|....|.|:.:..|||||
  Fly   142 YRAINTAFNIAYGSNSEEGPIALSGFQSQDTVNFAGYSIKNQIFAEITNAPETAFLKSQLDGILG 206

  Fly   186 MGFPSLAVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNV 250
            :||.|:|::.:||.|.|:|.||||...|||.:|..||:....||||||||||..||||.||||.|
  Fly   207 LGFASIAINSITPPFYNLMAQGLVNRSVFSIYLNRNGTNAINGGELILGGSDSGLYSGCLTYVPV 271

  Fly   251 VQAAYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFN----ANSEGLF--EC 309
            ..|.||:|......:.........:||.|.|||||:.|:...|.|:|:..    ..|.|:|  :|
  Fly   272 SSAGYWQFTMTSANLNGFQFCENCEAILDVGTSLIVVPEQVLDTINQILGVLNPTASNGVFLVDC 336

  Fly   310 SST-SYPDLIININGVDFKIPAKYYIIEEEDFCSLAIQSIN-QDFWIMGDVFLGRIYTEFDVGNQ 372
            ||. ..||::..:....|.:.:..|::...:.|.....|:| ....|:|::|||..||.:|:..:
  Fly   337 SSIGDLPDIVFTVARRKFPLKSSDYVLRYGNTCVSGFTSMNGNSLLILGEIFLGAYYTTYDIVYK 401

  Fly   373 RLGFAP 378
            .:|.||
  Fly   402 LIGLAP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 128/326 (39%)
Asp 76..379 CDD:278455 127/319 (40%)
CG31926NP_001259870.1 pepsin_retropepsin_like 82..406 CDD:299705 128/323 (40%)
Asp 89..408 CDD:278455 127/319 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439956
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D356089at33208
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.910

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