DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-16

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_741674.1 Gene:asp-16 / 260226 WormBaseID:WBGene00012682 Length:395 Species:Caenorhabditis elegans


Alignment Length:398 Identity:124/398 - (31%)
Similarity:204/398 - (51%) Gaps:40/398 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYN---RQYTANGYPMEHLS 70
            |||   |:.||...::.:.::|.:.:.:.:.........::|:..::.   :|......|:  :.
 Worm     3 LVF---LLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPL--ID 62

  Fly    71 NYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDH-------QVFYKNKSSTYV 128
            .||: .|..||::|||.|...|..||.|:||||..::|.|.||..:       |.|..|||||:|
 Worm    63 YYDD-MYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSSTFV 126

  Fly   129 ANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAV 193
            .....|||.||:|:.||||..|.:...|||:::|.|| |.|..|:.......|||.|:|:|:::|
 Worm   127 KGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFG-VATNLGSVLGSEPMDGIFGLGWPAISV 190

  Fly   194 DGVTPTFQNMMQQGLVQSPVFSFF------LRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQ 252
            |.|||..||::.|..:.:|:||.:      :...|:    ||.:..|..|.......:.||.:..
 Worm   191 DQVTPPMQNLISQKQLDAPLFSIWVDRKLQVSQGGT----GGLITYGAVDTKNCDAQVNYVALSS 251

  Fly   253 AAYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNANSEGLFE-----CSS- 311
            ..||:|..|.:.:|:.::....|||:|||::.:..|....:.|.|...|..:..:|     ||: 
 Worm   252 KTYWQFPMDGVAIGNYAMMKQEQAISDTGSAWLGLPNPVLNAIVQQTKATYDWNYEIYTLDCSTM 316

  Fly   312 TSYPDLIININGVDFKIPAKYYIIE---EEDFCSLAIQSI-NQDF---WIMGDVFLGRIYTEFDV 369
            .:.|||:..|.|:.:.:.:..||::   ....|.||:.|. |..|   :::|.||:.:....:|:
 Worm   317 QTQPDLVFTIGGMQYPVKSIEYILDLGLGNGRCVLAMLSYSNTGFGPSYVLGHVFIRQFCNVYDI 381

  Fly   370 GNQRLGFA 377
            ||.|:|||
 Worm   382 GNARIGFA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 114/337 (34%)
Asp 76..379 CDD:278455 112/328 (34%)
asp-16NP_741674.1 Asp 68..391 CDD:365818 112/327 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162084
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

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