DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-18

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_507653.2 Gene:asp-18 / 191310 WormBaseID:WBGene00013973 Length:392 Species:Caenorhabditis elegans


Alignment Length:410 Identity:133/410 - (32%)
Similarity:204/410 - (49%) Gaps:62/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAE---RDFVQQKYNRQYTANGYPMEHLSNYDNFQ 76
            |::||...::.:.::|...|.:|:   ..::.|   ..|:..:..:..|.:    :.|..:.:..
 Worm     4 LLLLVTTCSAAVFQVPTTTSGSFR---AKLIREGKYSSFLASRLQQLNTGS----QPLLGFSDDP 61

  Fly    77 YYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQD-------HQVFYKNKSSTYVANGTAF 134
            ..|||:||:|.|...|..||.|:||||.||:|.|..|.|       |: |...||:::|.:...|
 Worm    62 CIGNITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHK-FNTTKSTSFVKSNRKF 125

  Fly   135 SITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYF-----DGILGMGFPSLAVD 194
            :|.||:|..||||..|.|...||.||.|.||.      .|.||..|     |||.|:.:|:|:||
 Worm   126 NIQYGSGECSGYLGTDTVEIGGLKIQKQEFGV------ANIVDYDFGTRPIDGIFGLAWPALSVD 184

  Fly   195 GVTPTFQNMMQQGLVQSPVFSFFL--RD-------NGSVTFYGGELILGGSDPSLYSGSLTYVNV 250
            .|||..||::.|..:.:|:|:.|.  ||       ||.:|:       ||.|....:.:::||.|
 Worm   185 QVTPPMQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITY-------GGLDTKNCNANISYVPV 242

  Fly   251 VQAAYWKFQTDYIKVGSTSISTFA-QAIADTGTSLIIAPQAQYDQISQLFNAN-----SEGLFEC 309
            ....||:|:.|..:||:.:.:... |||.|||:|....|.:....|:...||.     |.....|
 Worm   243 SSKTYWQFKVDGFQVGTYNRTVNRDQAIMDTGSSWFGLPYSVIAGIATQTNATWDLYASVYTVPC 307

  Fly   310 SS-TSYPDLIININGVDFKIPAKYYIIE---EEDFCSLAIQSINQDFW----IMGDVFLGRIYTE 366
            |: .|.|||:..|....|.|.|..|:.:   ::..|:||:..|:...:    .:|::|:.|..:.
 Worm   308 STMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDGTCALAMYGIDASGFGPSVTLGNIFIRRYCSV 372

  Fly   367 FDVGNQRLGFAPV---NSAV 383
            |||||.|:|||..   ||.:
 Worm   373 FDVGNARIGFADAIHPNSVI 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 121/345 (35%)
Asp 76..379 CDD:278455 121/337 (36%)
asp-18NP_507653.2 Asp 63..385 CDD:365818 121/335 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162060
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.860

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