DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-15

DIOPT Version :10

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_741675.1 Gene:asp-15 / 189740 WormBaseID:WBGene00012681 Length:390 Species:Caenorhabditis elegans


Alignment Length:408 Identity:124/408 - (30%)
Similarity:192/408 - (47%) Gaps:65/408 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFL--------AGLIVLVGEANSTLRRIPIQ--KSPNFKRSHKNIVAERDFVQQKYNRQYTANG 63
            |:||        |.::.|..::..:||...||  |.|             :|:..::..:..:..
 Worm     3 LIFLLFIATFCSAAVLQLPTKSTGSLRAKLIQSGKYP-------------EFLASQHVSRLNSGA 54

  Fly    64 YPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQ-------VFYK 121
            .|   |::|.:..|..||::|||.|...|...|||:|.||.|:.|.|.||....       .||.
 Worm    55 LP---LADYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGCTSPACNGFPDSGHTKLKFYS 116

  Fly   122 NKSSTYVANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGM 186
            ||||::|.....|.|.|.||:.||||..|.:...|||:::|.|. |||:..........||:||:
 Worm   117 NKSSSFVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLDGVLGL 180

  Fly   187 GFPSLAVDGVTPTFQNMMQQGLVQSPVFSFFLRD--NGSVTFYGGELILGGSDPSLYSGSLTYVN 249
            .:|.:|||.:||..||:|.|  :.:|:|:.:|..  .||....||.:..|..|.......:.||.
 Worm   181 AWPPVAVDQITPPMQNLMPQ--LDAPIFTLWLDRVLQGSQGGSGGLITFGAIDTKNCDAQVNYVA 243

  Fly   250 VVQAAYWKFQTDYIKVGSTSISTFAQAIADTG-----------TSLIIAPQAQYDQISQLFNANS 303
            :....:|:|..|.:.:||.:.....|||:|:|           .::|...:|.||..::.:.   
 Worm   244 LSSKTFWQFPLDGVAIGSYTSMKKDQAISDSGDFGLRLPLAVLNAVIQQTKATYDWTNEFYT--- 305

  Fly   304 EGLFECSS-TSYPDLIININGVDFKIPAKYYIIE---EEDFCSLAI-----QSINQDFWIMGDVF 359
               .:||: .:.|||:..|.|:.:.:.:..||::   ....|.||:     ......|. .|:||
 Worm   306 ---LDCSTMQTQPDLVFTIGGMQYPVKSVEYILDLGLGNGRCVLAMFTDSSTGFGPSFG-FGNVF 366

  Fly   360 LGRIYTEFDVGNQRLGFA 377
            |.:....|||||.|:|||
 Worm   367 LRQYCNIFDVGNARIGFA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 Asp 76..379 CDD:394983 109/331 (33%)
asp-15NP_741675.1 pepsin_retropepsin_like 65..384 CDD:472175 107/328 (33%)

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