DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-17

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_741673.1 Gene:asp-17 / 180250 WormBaseID:WBGene00012683 Length:391 Species:Caenorhabditis elegans


Alignment Length:393 Identity:127/393 - (32%)
Similarity:200/393 - (50%) Gaps:34/393 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYD 73
            |:|   |:.|....::.:.::|.:.:.:.:.........::|:..::..:......|   :|:|.
 Worm     3 LIF---LLFLAPFCSAAVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQP---ISDYS 61

  Fly    74 NFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQ-------DHQVFYKNKSSTYVANG 131
            :..|.||.::|||.|...:..||||:|:||..:||.:..|.       ..|.|..:|||::....
 Worm    62 DEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCDNMFCNGWIGSNYTRQKFDTSKSSSFSREN 126

  Fly   132 TAFSITYGTGSVSGYLSVDCVGF-AGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDG 195
            ..|||.||.|..||||..|.||. .||||:.|..| :..:...:|.....|||.|:.:|:||||.
 Worm   127 RKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELG-IANKLDVDFAVQPMDGIFGLAWPALAVDQ 190

  Fly   196 VTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGE---LILGGSDPSLYSGSLTYVNVVQAAYWK 257
            :||..||::.|  :..||||.:| |......:||.   :..||.|.......:|||.:....||:
 Worm   191 ITPPMQNLISQ--LDVPVFSVWL-DRKIQASHGGSAGMITYGGIDTKNCDAGVTYVPLTAKTYWQ 252

  Fly   258 FQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNANSEGLFE-----CSS-TSYPD 316
            |:.|...||:.|...:.|.|:|||:|.|.||.|..:.|:...:|..:.:.|     ||: .:.||
 Worm   253 FKMDGFAVGTYSQYGYNQVISDTGSSWISAPYAMINDIATQTHATWDEMNEIYTVKCSTMKTQPD 317

  Fly   317 LIININGVDFKIPAKYYIIE---EEDFCSLAIQSINQD----FWIMGDVFLGRIYTEFDVGNQRL 374
            |:..|.|..|.:.:..||::   :|..|:|||..:...    .||:||||:.:....:|:||.|:
 Worm   318 LVFTIGGALFPVKSVEYILDIGLDEGKCALAISPLMASGFGPSWILGDVFIRQYCNIYDIGNARI 382

  Fly   375 GFA 377
            |||
 Worm   383 GFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 120/335 (36%)
Asp 76..379 CDD:278455 118/326 (36%)
asp-17NP_741673.1 Asp 65..387 CDD:365818 118/325 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162076
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.860

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