DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-13

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_505232.1 Gene:asp-13 / 179247 WormBaseID:WBGene00017881 Length:389 Species:Caenorhabditis elegans


Alignment Length:410 Identity:116/410 - (28%)
Similarity:194/410 - (47%) Gaps:67/410 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTAN-------- 62
            |.|::||     |:|.:.:.:            ..|:.|..|...::...|.:|.|.        
 Worm     3 IISIIFL-----LIGSSTAAV------------LEHQLIWKESRMIEMIRNGEYPAYLEYRDRMV 50

  Fly    63 -------GYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFY 120
                   ...::..::|..::|.|||::|||.|:|:|..||||:||.:||::| :|.|:..::|.
 Worm    51 ASRSSNLATVVQSTTDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC-TTYCEKKRLFN 114

  Fly   121 KNKSSTYVANGTAFSITYGTGSVSGYLSVDCV-----GFAGLTIQSQTFGEVTTEQGTNFVDAYF 180
            :..||||:|....:.|.|.:|...|.|.:|.|     |.|.|.|.....| |....|::|..:..
 Worm   115 EKASSTYIATNRPWQIKYASGDAYGTLGIDTVKIGGSGEAQLAIPRSYLG-VADTVGSDFKWSPK 178

  Fly   181 DGILGMGFPSLAVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSV-TFYGGELILGGSDPSLYSGS 244
            :||.|:.|.:||||.:||...|.:.|||:..|:|:.:....|:. |...|....||.|.:.....
 Worm   179 EGIFGLAFTALAVDNITPPIINAINQGLLDQPLFTTWFGQRGAPGTSASGAFTYGGLDKNHCGPV 243

  Fly   245 LTYVNVVQAAYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQI-----------SQL 298
            :.|..:..|.:::||.....:||...:|..:.|.||.||.:..|||..|.:           :|:
 Worm   244 IGYAELTNARHFQFQATGFSLGSYVSTTTYEVITDTATSFLCGPQAAIDNLAKAAGATWDPTNQV 308

  Fly   299 FNANSEGLFECSSTSYPDLIININGVDFKIPAKYYIIE-EEDFCSLAIQSINQDF------WIMG 356
            ||      ..|.:.:.| :.:.|...::.|.|..||:: :.:.|..|  :|.|::      ||:|
 Worm   309 FN------IPCDADAGP-IKMKIGQFNYVIRANNYILKIDTNSCLFA--AIPQNYAGFGPSWILG 364

  Fly   357 DVFLGRIYTEFDVGNQRLGF 376
            ..|:.:.....|:|.:|:||
 Worm   365 GPFMRQYCNVHDIGQKRVGF 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 104/334 (31%)
Asp 76..379 CDD:278455 103/325 (32%)
asp-13NP_505232.1 Asp 71..384 CDD:365818 101/323 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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