DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-5

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_505135.1 Gene:asp-5 / 179211 WormBaseID:WBGene00000218 Length:393 Species:Caenorhabditis elegans


Alignment Length:392 Identity:135/392 - (34%)
Similarity:206/392 - (52%) Gaps:34/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERD----FVQQK-----YNRQYTANGYPM 66
            |:| |:.|:|..::|:    :|....::.|.|..:..|.    :||.|     .:....||.  .
 Worm     5 FVA-LVALLGLCSATV----VQHKLIYRESIKMQMMRRGEWGAYVQHKAALRDADPAVYANA--P 62

  Fly    67 EHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYVANG 131
            ::::::.:|:|.|||:||||.|.|||..|||||||||||.|| ..:|:..:.:...||||:.|||
 Worm    63 QNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC-DGSCKGKREYQSTKSSTFKANG 126

  Fly   132 TAFSITYGTGSVSGYLSVDCVGFAGLT-----IQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSL 191
            ..:.|.||:|:..|||..|.|.|..:|     :.|.||| :.|...::|.:...:||||:.|.||
 Worm   127 KPWQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFG-IATHISSDFKNDAAEGILGLAFTSL 190

  Fly   192 AVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGS-LTYVNVVQAAY 255
            |||.|.|...|.:.|||:..|:|:.:|...||....||.:...|:..:...|. :.|..:..|.|
 Worm   191 AVDHVVPPLINAINQGLLDQPLFTVWLEHKGSANDVGGGVFTYGAVDTTNCGPVIAYQPLSSATY 255

  Fly   256 WKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQY----DQISQLFNANSEGLFECSSTSYPD 316
            ::|..|..|:||.|.|...|.|:|||||.:..|:|..    ..:...:::|.:..:...:|:...
 Worm   256 YQFVADSFKLGSYSNSKKYQVISDTGTSFLGGPKAVVAGLASALGATYHSNDDSYYVPCATNIGT 320

  Fly   317 LIININGVDFKIPAKYYIIE--EEDFCSLAIQSINQ----DFWIMGDVFLGRIYTEFDVGNQRLG 375
            |.|.|.|..:.|....||::  ..|.|..|..:.|.    ..||:||.|:.:....:|:|.||:|
 Worm   321 LDITIGGKVYSINPVNYIVDVGMGDTCVFAAFAFNNFGFGPAWILGDPFIRQFCNIYDIGGQRMG 385

  Fly   376 FA 377
            ||
 Worm   386 FA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 120/327 (37%)
Asp 76..379 CDD:278455 119/318 (37%)
asp-5NP_505135.1 Asp 72..387 CDD:365818 117/316 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162012
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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