DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and asp-6

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_505133.1 Gene:asp-6 / 179209 WormBaseID:WBGene00000219 Length:389 Species:Caenorhabditis elegans


Alignment Length:332 Identity:116/332 - (34%)
Similarity:180/332 - (54%) Gaps:27/332 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYVANG 131
            ::::::.:|:|.|||:||||.|.|:|..||||||||:||.:| .|.|:....|....|||:|.||
 Worm    61 QNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC-KTNCKTKSKFDSTASSTFVKNG 124

  Fly   132 TAFSITYGTGSVSGYLSVDCVGFAG-----LTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSL 191
            .:::|.||:|..:|.|..|.|.|..     |::.:.||| :.::...:|.:...|||||:.|.||
 Worm   125 KSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFG-IASKISADFKNDATDGILGLAFTSL 188

  Fly   192 AVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSL-TYVNVVQAAY 255
            |||||.|...|.:.||::..|:||.:|...|:....||.:...|:..:...|:| .|..:..|.|
 Worm   189 AVDGVVPPLINAINQGILDQPLFSVWLEHRGAANNVGGGVFTYGAIDTTNCGALVAYQPLSSATY 253

  Fly   256 WKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA-----NSEGLFECSSTSYP 315
            ::|:....|:||.|.:.....|:|||||.:..||:..|.:::...|     |.....:|:  :.|
 Worm   254 YQFKAAGFKLGSYSNTKTVDVISDTGTSFLGGPQSVVDGLAKAAGATYDDFNEVYFIDCA--AQP 316

  Fly   316 ---DLIININGVDFKIPAKYYIIEEEDFCSLAIQSINQDF------WIMGDVFLGRIYTEFDVGN 371
               |:.|..|....: |..|.:......|..|  :...||      ||:||.|:.:....:|:||
 Worm   317 GTLDITIGTNTYSIQ-PVNYIVDAGNGQCLFA--AFPFDFGGFGPSWILGDPFIRQYCNIYDIGN 378

  Fly   372 QRLGFAP 378
            :|:||||
 Worm   379 KRMGFAP 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 114/330 (35%)
Asp 76..379 CDD:278455 115/323 (36%)
asp-6NP_505133.1 Asp 70..385 CDD:278455 113/321 (35%)
pepsin_like 71..385 CDD:133138 113/320 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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