DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgcl and Ctse

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_031825.2 Gene:Ctse / 13034 MGIID:107361 Length:397 Species:Mus musculus


Alignment Length:401 Identity:165/401 - (41%)
Similarity:225/401 - (56%) Gaps:42/401 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFLAGLIVLVGEANSTLRRIPIQKSPN-------------FKRSHKNIVAERDFVQQKYNRQYT 60
            ||.|..|::.:.:|...|.|:|:::..:             |.||| |:...|  :.:..|...:
Mouse     5 LVLLLLLLLDLAQAQGALHRVPLRRHQSLRKKLRAQGQLSEFWRSH-NLDMTR--LSESCNVYSS 66

  Fly    61 ANGYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSS 125
            .|    |.|.||.:.:|:|.||||||.|:|.|.|||||||||||...|.|.||:.|.||:.::|.
Mouse    67 VN----EPLINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYCTSPACKAHPVFHPSQSD 127

  Fly   126 TYVANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPS 190
            ||...|..|||.|||||::|.:..|.|...|||:..|.|||...|.|..||:|.||||||:|:||
Mouse   128 TYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGLGYPS 192

  Fly   191 LAVDGVTPTFQNMMQQGLVQSPVFSFFLRDN---GSVTFYGGELILGGSDPSLYSGSLTYVNVVQ 252
            ||..||||.|.|||.|.||..|:||.:|..:   ||    |.||..||.|||.:||||.::.|.:
Mouse   193 LAAGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGS----GSELTFGGYDPSHFSGSLNWIPVTK 253

  Fly   253 AAYWKFQTDYIKVGSTSI--STFAQAIADTGTSLIIAPQAQYDQISQLFNA---NSEGLFECSS- 311
            .|||:...|.|:||.|.:  |...|||.|||||||..|..:..|:.:...|   :.|...:|:: 
Mouse   254 QAYWQIALDGIQVGDTVMFCSEGCQAIVDTGTSLITGPPDKIKQLQEAIGATPIDGEYAVDCATL 318

  Fly   312 TSYPDLIININGVDFKI-PAKYY---IIEEEDFCSLAIQSIN-----QDFWIMGDVFLGRIYTEF 367
            .:.|::...||.|.:.: |..|.   ::|...||....|.::     ...||:||||:.:.|:.|
Mouse   319 DTMPNVTFLINEVSYTLNPTDYILPDLVEGMQFCGSGFQGLDIPPPAGPLWILGDVFIRQFYSVF 383

  Fly   368 DVGNQRLGFAP 378
            |.||.::|.||
Mouse   384 DRGNNQVGLAP 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 147/328 (45%)
Asp 76..379 CDD:278455 145/321 (45%)
CtseNP_031825.2 A1_Propeptide 22..50 CDD:285240 5/27 (19%)
Asp 78..395 CDD:278455 145/321 (45%)
pepsin_retropepsin_like 79..394 CDD:299705 143/318 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841616
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I2599
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

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