DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and LOC101733630

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_012817292.3 Gene:LOC101733630 / 101733630 -ID:- Length:343 Species:Xenopus tropicalis


Alignment Length:324 Identity:138/324 - (42%)
Similarity:184/324 - (56%) Gaps:19/324 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSC--ISTACQDHQVFYKNKSSTYVANGTAF 134
            |...||||.|.:|:|.|:|.|.|||||||||||...|  :..||..|..:..:||||||.|||||
 Frog    18 YLQAQYYGEIGLGSPPQNFTVVFDTGSSNLWVPSVHCSMLDIACWMHHKYDSSKSSTYVKNGTAF 82

  Fly   135 SITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPT 199
            :|.|||||:|||||.|.|....|.::.|.|||...:.|..||.|.|||||||.:|.::||||.|.
 Frog    83 AIQYGTGSLSGYLSKDTVTIGNLAVKGQMFGEAVKQPGVTFVAAKFDGILGMAYPVISVDGVPPV 147

  Fly   200 FQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIK 264
            |.|:|.|.||:|.:|||:|..|.. |..||||:|||:||..|:|...|:||.:.|||:...|.:.
 Frog   148 FDNIMAQKLVESNIFSFYLNRNPD-TQPGGELLLGGTDPKYYTGDFHYLNVTRKAYWQIHMDQLG 211

  Fly   265 VGS--TSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA----NSEGLFECSST-SYPDLIININ 322
            ||.  |......:.|.|||||||..|..:...:.:...|    ..:.:.:|... :.|.:.:.:.
 Frog   212 VGDQLTLCKGGCEVIVDTGTSLITGPLEEVTALQKAIGAVPLIQGQYMVQCDKVPTLPVISLTLG 276

  Fly   323 GVDFKIPAKYYIIEEED---------FCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFA 377
            |..:.:..:.||::...         |..|.|.......||:||||:|:.|:.||....|:|||
 Frog   277 GQVYTLTGEQYIMKVSQRGSTICLSGFMGLNIPPPAGPLWILGDVFIGQYYSVFDRAYDRVGFA 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 138/324 (43%)
Asp 76..379 CDD:278455 137/320 (43%)
LOC101733630XP_012817292.3 Cathepsin_D2 18..341 CDD:133157 138/324 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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