DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and LOC100493461

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_002938556.2 Gene:LOC100493461 / 100493461 -ID:- Length:402 Species:Xenopus tropicalis


Alignment Length:408 Identity:158/408 - (38%)
Similarity:227/408 - (55%) Gaps:48/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFK--RSHKNIVAERDFVQQ--------KYNRQYT 60
            :|.|:.|.|.|.|.    :.|.|:|:.|   ||  |||   :.:||.:.:        .:.|:||
 Frog     1 MKVLLILVGCIQLA----TPLERVPLVK---FKSIRSH---LWQRDELNEFWLHHQPHIFARKYT 55

  Fly    61 ---------ANGYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDH 116
                     |.|...|:|.:|.|.||||.||:|||.|:|.|.|||||||.|||.|.|:|.|||.|
 Frog    56 QCFPPPYSLAAGTTTEYLVDYMNAQYYGEISVGTPPQNFSVVFDTGSSNFWVPSSYCLSEACQVH 120

  Fly   117 QVFYKNKSSTYVANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFD 181
            :.|...:|::|...|..|||.||||.:.|....|.:..:.::|:.|.|||...|.|..||.|.||
 Frog   121 ERFKSFESTSYEHGGRPFSIHYGTGQLVGVTGRDTLRISNMSIEGQDFGESILEPGRTFVLAQFD 185

  Fly   182 GILGMGFPSLAVDGVTPTFQNMMQQGLVQSPVFSFFL-RDNGSVTFYGGELILGGSDPSLYSGSL 245
            |:||:|:|||||.|..|.|..::.|.||:..:|||.| ||..|.  ||||||.||.|.|||.|.:
 Frog   186 GVLGLGYPSLAVAGAVPVFDRIVNQKLVEQQLFSFHLNRDYDSE--YGGELIFGGIDHSLYKGQI 248

  Fly   246 TYVNVVQAAYWKFQTDYIKVGSTSI--STFAQAIADTGTSLIIAPQAQYDQISQLFNAN----SE 304
            .::.:.:..||:.:.|.:||...::  .:..|.|.|:|||||..|:|:..::.:|..|.    .|
 Frog   249 HWIPLTEKGYWQIRLDNVKVDGEAMFCQSSCQVIVDSGTSLITGPKAEIKKLQELLGATPTLFGE 313

  Fly   305 GLFECSS-TSYPDLIININGVDFKIPAKYYIIEE----EDFCSLAIQSIN---QD--FWIMGDVF 359
            .:.:||. :|.|.:...|...|:.:..:.|.|:|    .|||....|:::   :|  .||:||:|
 Frog   314 YILDCSRVSSLPRVTFTIGQRDYTLTPEQYTIKERSQKSDFCLTGFQAMDISTKDGPLWILGDIF 378

  Fly   360 LGRIYTEFDVGNQRLGFA 377
            :.:.|:.||..:.|:|.|
 Frog   379 MSKFYSVFDREHDRIGLA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 136/328 (41%)
Asp 76..379 CDD:278455 132/319 (41%)
LOC100493461XP_002938556.2 A1_Propeptide 17..45 CDD:400357 11/33 (33%)
pepsin_retropepsin_like 75..397 CDD:416259 134/324 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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