DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and ctse

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001120469.1 Gene:ctse / 100145572 XenbaseID:XB-GENE-947864 Length:397 Species:Xenopus tropicalis


Alignment Length:393 Identity:159/393 - (40%)
Similarity:224/393 - (56%) Gaps:26/393 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QIKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHK------NIVAERDFVQQKYNRQYTANG 63
            ||..|:..|.|:.       .|.|:|:::..:.::..|      ::..::.....:|....:.|.
 Frog     3 QILLLLLFATLVY-------GLIRVPLKRQKSIRKKLKEKGKLSHVWTQQGIDMIQYTDSCSNNQ 60

  Fly    64 YPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYV 128
            .|.|.|.||.:.:|:|.||||||.|:|.|.|||||||||||...|||.||..|..|....||||.
 Frog    61 APSEPLINYMDVEYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYCISPACAQHNRFQPQFSSTYQ 125

  Fly   129 ANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAV 193
            :||..||:.|||||:||.:..|.|...|:.:|||.|||..:|.|:.||||.||||||:|:||:||
 Frog   126 SNGNNFSLQYGTGSLSGIIGTDSVSVEGILVQSQQFGESVSEPGSTFVDAEFDGILGLGYPSIAV 190

  Fly   194 DGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKF 258
            ...||.|.|||.|.||:.|:||.::..|.: :..||||:.||.|.|.:||.|.:|:|....||:.
 Frog   191 GDCTPVFDNMMTQNLVELPMFSVYMSRNPN-SPVGGELVFGGFDASRFSGQLNWVSVTNQGYWQI 254

  Fly   259 QTDYIKVGSTSI--STFAQAIADTGTSLIIAPQAQYDQISQLFN---ANSEGLFECS-STSYPDL 317
            |.|.|::....:  :...|||.|||||||..|.:...|:..:..   ||.:...:|| ....|.:
 Frog   255 QLDNIQINGEVVFCTGGCQAIVDTGTSLITGPSSDIVQLQSIIGASAANGDYEVDCSVLNEMPTV 319

  Fly   318 IININGVDFKI-PAKYYIIEEEDFCSLAIQSIN-----QDFWIMGDVFLGRIYTEFDVGNQRLGF 376
            ...|||:.::: |.:|.:.:....||...|.::     ...||:||||:|:.|:.||.||.|:|.
 Frog   320 TFTINGIGYQMTPQQYTLQDGGGICSSGFQGLDISPPAGPLWILGDVFIGQYYSVFDRGNNRVGL 384

  Fly   377 APV 379
            |||
 Frog   385 APV 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 144/322 (45%)
Asp 76..379 CDD:278455 141/314 (45%)
ctseNP_001120469.1 A1_Propeptide 17..42 CDD:369623 4/24 (17%)
pepsin_retropepsin_like 74..386 CDD:386101 140/312 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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