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Protein Alignment l(1)sc and AT1G10585
DIOPT Version :9
Sequence 1: | NP_476623.1 |
Gene: | l(1)sc / 30983 |
FlyBaseID: | FBgn0002561 |
Length: | 257 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_563873.2 |
Gene: | AT1G10585 / 837600 |
AraportID: | AT1G10585 |
Length: | 181 |
Species: | Arabidopsis thaliana |
Alignment Length: | 27 |
Identity: | 9/27 - (33%) |
Similarity: | 16/27 - (59%) |
Gaps: | 0/27 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 RRNARERNRVKQVNNGFVNLRQHLPQT 113
:||.||::|..::.:.|..|..|:..|
plant 18 QRNLREKDRRMRMKHLFSILSSHVSPT 44
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
l(1)sc | NP_476623.1 |
HLH |
<96..146 |
CDD:278439 |
4/18 (22%) |
Peptidase_C11 |
<128..218 |
CDD:304483 |
|
AT1G10585 | NP_563873.2 |
HLH |
12..67 |
CDD:320748 |
9/27 (33%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13935 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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