DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and Tcf23

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_006504158.1 Gene:Tcf23 / 69852 MGIID:1934960 Length:216 Species:Mus musculus


Alignment Length:139 Identity:35/139 - (25%)
Similarity:49/139 - (35%) Gaps:55/139 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 ARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYI------------ 142
            ||||.|||.:...|:.|:..||....::          ||||:|.|.:|..||            
Mouse    82 ARERTRVKTLRQAFLALQAALPAVPPDT----------KLSKLDVLVLATSYIAHLTRTLGHELP 136

  Fly   143 --------RGLQDM---------------------LDDGTASSTRHIYNSADESSNDGSSYNDYN 178
                    |||:.:                     ||..||.:|......|:..|.|..:    .
Mouse   137 GPAWPPFVRGLRYLHPLKKWPMRSRLYAGGLGCSDLDSTTAITTGQRCKDAELGSQDSVA----A 197

  Fly   179 DSLDSSQQF 187
            :||.:|..|
Mouse   198 ESLLTSPAF 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 19/95 (20%)
Tcf23XP_006504158.1 bHLH_TS_TCF23_OUT 77..132 CDD:381552 20/59 (34%)

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