DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and TCF15

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_004600.3 Gene:TCF15 / 6939 HGNCID:11627 Length:199 Species:Homo sapiens


Alignment Length:70 Identity:27/70 - (38%)
Similarity:38/70 - (54%) Gaps:16/70 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDML---- 149
            |||||:|.:.||..|..||..:|...|:          :||||::|:|:|..||..|.::|    
Human    78 NARERDRTQSVNTAFTALRTLIPTEPVD----------RKLSKIETVRLASSYIAHLANVLLLGD 132

  Fly   150 --DDG 152
              |||
Human   133 SADDG 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 18/54 (33%)
TCF15NP_004600.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..67
bHLH_TS_TCF15_paraxis 66..131 CDD:381476 24/62 (39%)
Blue background indicates that the domain is not in the aligned region.

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