DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and TAL2

DIOPT Version :9

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_005412.1 Gene:TAL2 / 6887 HGNCID:11557 Length:108 Species:Homo sapiens


Alignment Length:121 Identity:34/121 - (28%)
Similarity:47/121 - (38%) Gaps:23/121 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGT 153
            |.|||.|.:.||:.|..||:.:|.          ....|||||.:|||:|:.||..|..:|.:.:
Human     8 NTRERWRQQNVNSAFAKLRKLIPT----------HPPDKKLSKNETLRLAMRYINFLVKVLGEQS 62

  Fly   154 ASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYHSASPTPSY 209
            ...|             |.:.......|......|.|........:|...||.||:
Human    63 LQQT-------------GVAAQGNILGLFPQGPHLPGLEDRTLLENYQVPSPGPSH 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 HLH <96..146 CDD:278439 17/49 (35%)
Peptidase_C11 <128..218 CDD:304483 22/82 (27%)
TAL2NP_005412.1 bHLH_TS_TAL2 2..62 CDD:381550 24/63 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..108 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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