Protein Alignment l(1)sc and olig3

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001103863.1
• Gene: olig3 / 566728
• ZFINID: ZDB-GENE-080903-1
• Length: 255
• Species: Danio rerio
• Alignment Length: 205
• Identity: 55/205 - (26%)
• Similarity: 82/205 - (40%)
• Gaps: 35/205 - (17%)

  Fly    23 LLQHQHHHQTQQHQLIAPKIPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVAR 87
            :..|.|||...|..|:..........||.|.....|.. |..|..|.|........ :||.  .:
Zfish    18 MYHHHHHHHHHQDGLLNSVSSTQNELLQKMASEHLSKT-PSGSKYKLKKQVTEQEI-QQLR--LK 78

  Fly    88 RNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDD- 151
            .|.|||.|:..:|.....||:.:|      .::|  .|.:||||:.||.:|..||..|...||:
Zfish    79 INGRERKRMHDLNLAMDGLREVMP------YAHG--PSVRKLSKIATLLLARNYILMLTSSLDEM 135

  Fly   152 --------GTASSTRHIYN-SADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQS---------- 197
                    |...|..|... |...:.:.|:::..::..|.|:   |:|:|.|..|
Zfish   136 KRLVGEIYGGHHSAFHCGTVSHGGAHSAGAAHQVHHPLLGSA---LSGSTSSTLSLPGLTSIRAP 197

  Fly   198 HSYHSASPTP 207
            |:...::|||
Zfish   198 HTLMKSTPTP 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
olig3	NP_001103863.1	bHLH_TS_OLIG3	60..140	CDD:381511	27/90 (30%)