Protein Alignment l(1)sc and olig3

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001008191.1
• Gene: olig3 / 493553
• XenbaseID: XB-GENE-919789
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 239
• Identity: 56/239 - (23%)
• Similarity: 89/239 - (37%)
• Gaps: 46/239 - (19%)

  Fly     1 MTSICSSKFQQQHYQLTNSNIFLLQHQHHHQTQQHQLIAPKIPLGTSQLQNMQQSQQSNVGPMLS 65
            |:|..||...:..|         |:..|....:...:.:.:    ...||.|.:...|..|....
 Frog     8 MSSRASSPDMEDMY---------LRSHHRPDNRMSSVSSTQ----NDMLQKMSEEMLSKHGSRGE 59

  Fly    66 SQKKKFNYNNMPYGEQLPSVARR-NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKL 129
            .:..|:........:.|..:..: |.|||.|:..:|.....||:.:|      .::|  .|.:||
 Frog    60 GESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMP------YAHG--PSVRKL 116

  Fly   130 SKVDTLRIAVEYIRGLQDMLDD---------GTASSTRH---IYNSADESSNDGSSYNDYNDSLD 182
            ||:.||.:|..||..|...|::         |...|..|   :.:||:...:..::.:..:..|.
 Frog   117 SKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAFHCGTVGHSANHPVHPPNAAHQVHPILG 181

  Fly   183 SSQQFLTGATQSAQSHSY---------HSASPTPSYSGSEISGG 217
            ||   |...|.|:.|.|.         ||...|||.....|..|
 Frog   182 SS---LCSNTPSSLSASLPGIGTIRPAHSLLKTPSTPPLSIGSG 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
olig3	NP_001008191.1	bHLH_SF	64..144	CDD:469605	24/87 (28%)