Protein Alignment l(1)sc and Fer3

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_524322.1
• Gene: Fer3 / 41411
• FlyBaseID: FBgn0037937
• Length: 195
• Species: Drosophila melanogaster
• Alignment Length: 213
• Identity: 50/213 - (23%)
• Similarity: 79/213 - (37%)
• Gaps: 69/213 - (32%)

  Fly    27 QHHHQTQQHQLI------------APKIPLGTSQ-------LQNMQQSQQSNVGPML-------- 64
            ||.|...|...:            ||..|:...|       ..::...|:|.|.|::
  Fly     2 QHPHPIDQPTYMPDVPFQPLWGQEAPPPPIVPYQELIAGFPCTDLSLWQRSQVTPLVPQRPSTNG 66

  Fly    65 -----SSQKKKFNYNNMPYGEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNG 121
                 ||..||..       .::.|:|:|   |.|||.|:..:|..|..||:.:|....
  Fly    67 RANGSSSSSKKTR-------RRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAY------ 118

  Fly   122 GRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQ 186
                .|:||:::|||:|:.||..:.::| .||             .||...|.:|...|::...|
  Fly   119 ----EKRLSRIETLRLAITYIGFMAELL-SGT-------------PSNSHKSRSDVYGSMNGHHQ 165

  Fly   187 FLTGATQSAQSHSYHSAS 204
               ....:...|..|.|:
  Fly   166 ---APPPAIHPHHLHPAA 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	15/54 (28%)
Fer3	NP_524322.1	bHLH_TS_FERD3L_NATO3	79..142	CDD:381421	22/79 (28%)