Protein Alignment l(1)sc and Ascl5

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001385517.1
• Gene: Ascl5 / 363991
• RGDID: 1561854
• Length: 188
• Species: Rattus norvegicus
• Alignment Length: 144
• Identity: 45/144 - (31%)
• Similarity: 64/144 - (44%)
• Gaps: 46/144 - (31%)

  Fly    85 VARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDML 149
            :.:||.|||.|||.||.|:..||.|||          |..:.|:||||:|||.|:.||:.||::|
  Rat    82 IQKRNERERQRVKCVNEGYARLRGHLP----------GALAEKRLSKVETLRAAIRYIKYLQELL 136

  Fly   150 DDGTASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYH-SASPTPSY---- 209
                            .::.||:.               ..||....:|:.| :|...||.
  Rat   137 ----------------SAAPDGAP---------------PTATSPPPAHAGHGNALQPPSLVAES 170

  Fly   210 SGSEISGGGYIKQE 223
            |||..|...:::.|
  Rat   171 SGSSFSPSPFLESE 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	25/54 (46%)
Ascl5	NP_001385517.1	bHLH_TS_ASCL5	76..136	CDD:381590	30/63 (48%)