Protein Alignment l(1)sc and olig2

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_835201.1
• Gene: olig2 / 325288
• ZFINID: ZDB-GENE-030131-4013
• Length: 273
• Species: Danio rerio
• Alignment Length: 177
• Identity: 44/177 - (24%)
• Similarity: 79/177 - (44%)
• Gaps: 19/177 - (10%)

  Fly    47 SQLQNMQQSQQSNVG-PMLSSQKKKFNYNNMPYGEQLPSVARR-NARERNRVKQVNNGFVNLRQH 109
            :.::.:..:::.::. .|||.:.:|....|     :|.|:..: |:|||.|:..:|.....||:.
Zfish    49 ADMRGISSAEEDSMALKMLSKKDRKLLSEN-----ELQSMRLKINSRERKRMHDLNIAMDGLREV 108

  Fly   110 LPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESSNDGSSY 174
            :|      .::|  .|.:||||:.||.:|..||..|.:.|:: .......||.....:.:.|...
Zfish   109 MP------YAHG--PSVRKLSKIATLLLARNYILMLSNSLEE-MKRLVSEIYGGGSGAHHAGFHP 164

  Fly   175 NDYNDSLDSSQQFLTG--ATQSAQSHSYHSASPTPSYS-GSEISGGG 218
            :.......::...|.|  |..|..||..|.....|:.| .:.:||.|
Zfish   165 SSCGTLTHAAAAPLPGHPAAVSHSSHPVHHPLLPPAVSTAASLSGTG 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
olig2	NP_835201.1	bHLH_TS_OLIG2	69..151	CDD:381510	26/95 (27%)