Protein Alignment l(1)sc and Msc

DIOPT Version :9

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: XP_008761698.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 63
• Identity: 23/63 - (36%)
• Similarity: 35/63 - (55%)
• Gaps: 10/63 - (15%)

  Fly    89 NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDD 151
            |||||.|::.::..|..|:..||....::          ||||:||||:|..||..|:.:|.:
  Rat   110 NARERARMRVLSKAFSRLKTSLPWVPPDT----------KLSKLDTLRLASSYIAHLRQLLQE 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	HLH	<96..146	CDD:278439	15/49 (31%)
		Peptidase_C11	<128..218	CDD:304483	13/24 (54%)
Msc	XP_008761698.1	bHLH_TS_musculin	102..167	CDD:381546	23/63 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900