DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and tal1

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_998402.1 Gene:tal1 / 30766 ZFINID:ZDB-GENE-980526-501 Length:324 Species:Danio rerio


Alignment Length:256 Identity:61/256 - (23%)
Similarity:91/256 - (35%) Gaps:83/256 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LQHQHHHQTQQHQLIAPKIPLGTSQLQNMQQSQQSNVG-PMLSSQKKKFNYNNM----------- 76
            |:.:..|:.|..:|..|.|||.......:..::...:. |......:...|:||           
Zfish    86 LKAELSHKVQTTELCRPPIPLPLPPRDPLSDTRMVQLSPPAFPLPARAMLYSNMTTPLATINSGF 150

  Fly    77 --------------------PY------GEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQ 112
                                ||      |.| |.:.||   |:|||.|.:.||..|..||:.:|.
Zfish   151 AGDAEQYGMYPSNRVKRRPAPYEVEINDGSQ-PKIVRRIFTNSRERWRQQNVNGAFAELRKLIPT 214

  Fly   113 TVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDD-----GTASSTRHIYNSADESSNDGS 172
                      ....|||||.:.||:|::||..|..:|:|     |..:..|     |:..|.|.:
Zfish   215 ----------HPPDKKLSKNEILRLAMKYINFLAKLLNDQDDMVGGEAPAR-----ANRDSRDAT 264

  Fly   173 SYNDYNDSLDSSQQFLTGATQSAQSHSYHSASPTPSYSGSEISGGGYIKQELQEQDLKFDS 233
            ...|     |..|:.|               ||..| .||.:.|....:...::||...:|
Zfish   265 LVRD-----DLLQEML---------------SPNSS-CGSLLDGDASPESFTEDQDSSVES 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 18/54 (33%)
tal1NP_998402.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
bHLH_TS_TAL1 183..247 CDD:381549 26/73 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..324 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.

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