Protein Alignment l(1)sc and neurod1

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_571053.1
• Gene: neurod1 / 30169
• ZFINID: ZDB-GENE-990415-172
• Length: 350
• Species: Danio rerio
• Alignment Length: 204
• Identity: 48/204 - (23%)
• Similarity: 82/204 - (40%)
• Gaps: 49/204 - (24%)

  Fly    61 GP----MLSSQKKKFNYNNMPYGEQLPSVARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNG 121
            ||    |..::.::|....|          :.|||||||:..:|:...:||:.:|
Zfish    80 GPKKKKMTKARMQRFKMRRM----------KANARERNRMHGLNDALESLRKVVP---------- 124

  Fly   122 GRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESSNDGSS--------YNDYN 178
            ....::||||::|||:|..||..|.::|..|.:........:..:..:..::        .|...
Zfish   125 CYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLMSFVQALCKGLSQPTTNLVAGCLQLNPRT 189

  Fly   179 DSLDSSQQF-----LTGATQSAQSHSYHSAS-PTPSYSGSEISGGGYIKQELQEQDLK--FD--- 232
            ...:.||:.     ...|:.||..:||.:.. |:|.|...:.|...::|.......|:  ||
Zfish   190 FLPEQSQEMPPHMQTASASFSALPYSYQTPGLPSPPYGTMDSSHIFHVKPHAYGSALEPFFDTTL 254

  Fly   233 ------SFD 235
                  |||
Zfish   255 TDCTSPSFD 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
neurod1	NP_571053.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..91		3/10 (30%)
		Nuclear localization signal. /evidence=ECO:0000255	82..88		1/5 (20%)
		bHLH_TS_NeuroD6_ATOH2	86..153	CDD:381565	25/86 (29%)
		Neuro_bHLH	155..277	CDD:463621	20/109 (18%)