Protein Alignment l(1)sc and Ascl4

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001386646.1
• Gene: Ascl4 / 299687
• RGDID: 1307533
• Length: 145
• Species: Rattus norvegicus
• Alignment Length: 101
• Identity: 37/101 - (36%)
• Similarity: 57/101 - (56%)
• Gaps: 21/101 - (20%)

  Fly    77 PYGEQLPSVAR-RNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVE 140
            |.|...|:..| ||.|||.||:.||.|:..||||||:.:          :.::||||:|||.|:.
  Rat    52 PGGVAEPAFLRQRNERERQRVRCVNEGYARLRQHLPREL----------AGQRLSKVETLRAAIG 106

  Fly   141 YIRGLQDMLDDGTASSTRH---IYNSADESSNDGSS 173
            ||:.||::|:       ||   :.:..:..::.|:|
  Rat   107 YIKQLQELLE-------RHRPDLNSDGESKASSGAS 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	23/54 (43%)
Ascl4	NP_001386646.1	bHLH_SF	57..116	CDD:469605	30/68 (44%)