Protein Alignment l(1)sc and Nhlh1

DIOPT Version :9

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001099440.1
• Gene: Nhlh1 / 289230
• RGDID: 1310261
• Length: 133
• Species: Rattus norvegicus
• Alignment Length: 119
• Identity: 33/119 - (27%)
• Similarity: 48/119 - (40%)
• Gaps: 44/119 - (36%)

  Fly    42 IPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARRNA----------RERNRV 96
            :.||.|..:::|.         ||.::::               .||.|          |||.||
  Rat    48 LELGESGRKDLQH---------LSREERR---------------RRRRATAKYRTAHATRERIRV 88

  Fly    97 KQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLD 150
            :..|..|..||:.||..          ...|||||::.||:|:.||..|..:||
  Rat    89 EAFNLAFAELRKLLPTL----------PPDKKLSKIEILRLAICYISYLNHVLD 132

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	HLH	<96..146	CDD:278439	17/49 (35%)
		Peptidase_C11	<128..218	CDD:304483	12/23 (52%)
Nhlh1	NP_001099440.1	bHLH_TS_HEN1	61..132	CDD:381544	27/95 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900