Protein Alignment l(1)sc and neurod4

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_739568.2
• Gene: neurod4 / 266958
• ZFINID: ZDB-GENE-030730-1
• Length: 348
• Species: Danio rerio
• Alignment Length: 275
• Identity: 61/275 - (22%)
• Similarity: 92/275 - (33%)
• Gaps: 101/275 - (36%)

  Fly    13 HYQLTNSNIFLLQHQHHHQTQQHQLIAPKIPLGTSQLQNMQQSQQ-------SNVGPMLSSQKKK 70
            ||.|..||                  ...:.:|:..:...::.::       ....|.....|||
Zfish    39 HYSLHRSN------------------RGPLEIGSEDMDEEEEEEEDEEMGLDGEKAPKRRGPKKK 85

  Fly    71 FNYNNMPYGEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKV 132
                .|....|....|||   |||||:|:..:|:...|||:.:|          ....::||||:
Zfish    86 ----KMTKARQERFRARRIKANARERSRMHGLNDALDNLRRVMP----------CYSKTQKLSKI 136

  Fly   133 DTLRIAVEYIRGLQDMLDDGTASSTRHIYNS-----ADESSN----------------------- 169
            :|||:|..||..|.::|:.|.:..:......     :..:||
Zfish   137 ETLRLARNYIWALSEVLESGQSPESHGFVEMLCKGLSQPTSNLVAGCLQLGPTTMLKLDEKCGVP 201

  Fly   170 -----DGSSYNDYNDSLDSSQQFLTGATQSAQSH----------SYHSASP------TPSYSGS- 212
                 .|...:..:..|.|...    .|..| ||          .|.::||      ||.|.|.
Zfish   202 GAGVPQGHPISYPSPGLPSPPY----GTMEA-SHLLHLKGYKGPPYENSSPNECSSGTPPYDGPL 261

  Fly   213 ----EISGGGYIKQE 223
                .|||...:|||
Zfish   262 TPPLSISGNFALKQE 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
neurod4	NP_739568.2	bHLH_TS_NeuroD4_ATOH3	70..155	CDD:381564	32/98 (33%)
		Neuro_bHLH	156..272	CDD:463621	20/120 (17%)