Protein Alignment l(1)sc and Ascl3

DIOPT Version :9

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001258163.1
• Gene: Ascl3 / 246301
• RGDID: 621631
• Length: 174
• Species: Rattus norvegicus
• Alignment Length: 78
• Identity: 33/78 - (42%)
• Similarity: 44/78 - (56%)
• Gaps: 10/78 - (12%)

  Fly    72 NYNNMPYGEQLPSVARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLR 136
            ||....|......:.:||.|||.|||.||.|:..||:|||:..:          .|:||||:|||
  Rat    81 NYRRCDYTYGPAFIRKRNERERQRVKCVNEGYARLRRHLPEDYL----------EKRLSKVETLR 135

  Fly   137 IAVEYIRGLQDML 149
            .|::||..||.:|
  Rat   136 AAIKYISYLQSLL 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	HLH	<96..146	CDD:278439	21/49 (43%)
		Peptidase_C11	<128..218	CDD:304483	13/22 (59%)
Ascl3	NP_001258163.1	bHLH_TS_ASCL3	90..148	CDD:381588	29/67 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000