DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and FERD3L

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_690862.1 Gene:FERD3L / 222894 HGNCID:16660 Length:166 Species:Homo sapiens


Alignment Length:77 Identity:23/77 - (29%)
Similarity:42/77 - (54%) Gaps:13/77 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PYGEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIA 138
            |..:::.:.|:|   |.|||.|:..:|..|..||:.:|....          .|:||:::|||:|
Human    92 PKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAY----------EKRLSRIETLRLA 146

  Fly   139 VEYIRGLQDMLD 150
            :.||..:.::|:
Human   147 IVYISFMTELLE 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 15/54 (28%)
FERD3LNP_690862.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..88
bHLH_TS_FERD3L_NATO3 94..157 CDD:381421 21/72 (29%)
Blue background indicates that the domain is not in the aligned region.

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