DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and Tal1

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_035657.1 Gene:Tal1 / 21349 MGIID:98480 Length:329 Species:Mus musculus


Alignment Length:208 Identity:51/208 - (24%)
Similarity:78/208 - (37%) Gaps:48/208 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LIAPKIPLGTSQLQNMQQSQQS---------NVGPMLSSQKKKFNYNN------MPYGEQL---- 82
            |.||..| |.:.|.::.|...|         :..||       |..||      .||..::    
Mouse   126 LAAPAGP-GRALLYSLSQPLASLGSGFFGEPDAFPM-------FTNNNRVKRRPSPYEMEISDGP 182

  Fly    83 -PSVARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIR 143
             ..|.||   |:|||.|.:.||..|..||:.:|.          ....|||||.:.||:|::||.
Mouse   183 HTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPT----------HPPDKKLSKNEILRLAMKYIN 237

  Fly   144 GLQDMLDDGTASSTRH-------IYNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYH 201
            .|..:|:|.....|:.       :..:....:..|....|....:.|.......:...|.|...:
Mouse   238 FLAKLLNDQEEEGTQRAKPGKDPVVGAGGGGAGGGIPPEDLLQDVLSPNSSCGSSLDGAASPDSY 302

  Fly   202 SASPTPSYSGSEI 214
            :..|||.::...:
Mouse   303 TEEPTPKHTSRSL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 18/54 (33%)
Tal1NP_035657.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..78
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..125
bHLH_TS_TAL1 185..249 CDD:381549 27/73 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..329 9/69 (13%)
Blue background indicates that the domain is not in the aligned region.

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