DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and hlh-13

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_508725.1 Gene:hlh-13 / 185980 WormBaseID:WBGene00001957 Length:147 Species:Caenorhabditis elegans


Alignment Length:99 Identity:32/99 - (32%)
Similarity:47/99 - (47%) Gaps:19/99 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PMLSSQKKKF----NYNNMPYGEQLPSVARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGG 122
            |..||..|.|    :|::. |.|:.......:.|||.|:..:|..|:.||.::|....       
 Worm    17 PSYSSLSKLFFMDSSYDSY-YCEEPEERQTASIRERKRMCSINVAFIELRNYIPTFPY------- 73

  Fly   123 RGSSKKLSKVDTLRIAVEYIRGLQDML----DDG 152
               .|:|||:|||.:|:.||..|.|:|    |.|
 Worm    74 ---EKRLSKIDTLNLAIAYINMLDDVLRTPEDSG 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 18/54 (33%)
hlh-13NP_508725.1 bHLH_SF 38..100 CDD:469605 23/71 (32%)

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