DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and hlh-15

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_508440.1 Gene:hlh-15 / 183427 WormBaseID:WBGene00001959 Length:89 Species:Caenorhabditis elegans


Alignment Length:59 Identity:23/59 - (38%)
Similarity:30/59 - (50%) Gaps:10/59 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 RERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDML 149
            |||.||:..|..|..||..||...|          .|||||::.||.::.||..|.::|
 Worm    40 RERIRVESFNMAFSQLRALLPTLPV----------EKKLSKIEILRFSIAYISFLDNLL 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 19/54 (35%)
hlh-15NP_508440.1 bHLH_TS_HEN 32..88 CDD:381420 22/57 (39%)

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