Protein Alignment l(1)sc and cnd-1

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001379767.1
• Gene: cnd-1 / 183212
• WormBaseID: WBGene00000561
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 178
• Identity: 48/178 - (26%)
• Similarity: 71/178 - (39%)
• Gaps: 45/178 - (25%)

  Fly    52 MQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQT 113
            |:.:..||..|...|::|                .||   |.|||.|:..:||....||:::|.|
 Worm     1 MRPTDTSNFAPAEISKRK----------------VRRVKANGRERARMHGLNNALDMLREYIPIT 49

  Fly   114 VVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDML---DDGTASSTRH-IYNSADESSNDGSSY 174
            .          ..:||||::|||:|..||..||.||   :..|.....| :.|...:::.
 Worm    50 T----------QHQKLSKIETLRLARNYIDALQRMLQTNEQPTPLEYAHTLANGLSQTTT----- 99

  Fly   175 NDYNDSLDSSQQFLTGATQ-----SAQSHSYHSASPTP--SYSGSEIS 215
            |...:.|....:.|...:|     ....|..|.:.|.|  |:|.|..|
 Worm   100 NMLANLLQVQPRQLLPPSQFDIFSDPSHHQLHPSHPPPHSSFSSSSPS 147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	19/54 (35%)
cnd-1	NP_001379767.1	bHLH_TS_NeuroD	21..75	CDD:381433	24/63 (38%)
		Neuro_bHLH	78..>126	CDD:463621	7/52 (13%)