Protein Alignment l(1)sc and Msc

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001398640.1
• Gene: Msc / 17681
• MGIID: 1333884
• Length: 238
• Species: Mus musculus
• Alignment Length: 144
• Identity: 36/144 - (25%)
• Similarity: 54/144 - (37%)
• Gaps: 46/144 - (31%)

  Fly    89 NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDML-DDG 152
            |||||.|::.::..|..|:..||....::          ||||:||||:|..||..|:.:| :|.
Mouse   108 NARERARMRVLSKAFSRLKTSLPWVPPDT----------KLSKLDTLRLASSYIAHLRQLLQEDR 162

  Fly   153 TASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYHSASPTPSYSGSEISGG 217
            ...|..|..|                         |.|..:|....|.....|.|
Mouse   163 YEDSYVHPVN-------------------------LVGMLRSRPGDSSPERYPGP---------- 192

  Fly   218 GYIKQELQEQDLKF 231
            |..:.:.:.|:.:|
Mouse   193 GLARPQTKSQEGRF 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
Msc	NP_001398640.1	bHLH_TS_musculin	100..165	CDD:381546	24/66 (36%)