Protein Alignment l(1)sc and hlh-3

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_495938.4
• Gene: hlh-3 / 174447
• WormBaseID: WBGene00001950
• Length: 170
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 51/158 - (32%)
• Similarity: 68/158 - (43%)
• Gaps: 56/158 - (35%)

  Fly    87 RRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDD 151
            :||.|||.||.|||.|||.|::.:|:..         |:..|||||:|||.|..||:.||..|
 Worm    30 KRNERERKRVDQVNQGFVLLQERVPKAA---------GNKAKLSKVETLREAARYIQELQKQL-- 83

  Fly   152 GTASSTRHIYNSAD------------------------------------ESSN--DGSSYNDYN 178
            |.:|::.|....||                                    .|||  |.||:. |.
 Worm    84 GMSSTSFHNSMPADFPTPEQSPVYPQSVCSMMAQTPSPSYTSPYYPPPQMMSSNQHDMSSHY-YQ 147

  Fly   179 DSLDSSQQFLTGATQSAQSHSYHSASPT 206
            :|..||      |:.|...||::|.:.|
 Worm   148 ESSSSS------ASTSGDHHSFYSHTET 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	24/54 (44%)
hlh-3	NP_495938.4	bHLH_TS_ASCL	28..83	CDD:381424	29/61 (48%)
		COG3416	<47..>136	CDD:442642	23/99 (23%)