DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and Bhlha15

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_034930.1 Gene:Bhlha15 / 17341 MGIID:891976 Length:197 Species:Mus musculus


Alignment Length:145 Identity:43/145 - (29%)
Similarity:61/145 - (42%) Gaps:31/145 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVE 140
            |.:..||.||   |.|||.|:.::||.|..||:.:|..          .:.|||||::||.:|..
Mouse    65 GRRENSVQRRLESNERERQRMHKLNNAFQALREVIPHV----------RADKKLSKIETLTLAKN 119

  Fly   141 YIRGLQDMLDDGTASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQ------FLTGATQ------ 193
            ||:.|...:  .|.||:|.....|...:.....|..|:......||      .:.|.|:      
Mouse   120 YIKSLTATI--LTMSSSRLPGLEAPGPAPGPKLYQHYHHQQQQQQQQQQVAGAMLGVTEDQPQGH 182

  Fly   194 ----SAQSHSYHSAS 204
                |.|.||:...|
Mouse   183 LQRYSTQIHSFREGS 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 18/54 (33%)
Bhlha15NP_034930.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 7/16 (44%)
bHLH_TS_MIST1 73..134 CDD:381554 26/72 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..197 4/18 (22%)

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