DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and OLIG3

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_786923.1 Gene:OLIG3 / 167826 HGNCID:18003 Length:272 Species:Homo sapiens


Alignment Length:207 Identity:39/207 - (18%)
Similarity:69/207 - (33%) Gaps:80/207 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 MEKDKKDGIDSSFTLETLAVDLFDLWQAGQETTSTTLTWACACLLNHPEVVEKLRKELTEVTGGA 345
            |.|.|   :|:.|    .:|::.|       :|.|.|               |..:.|..:..||
Human     1 MSKSK---VDNQF----YSVEVGD-------STFTVL---------------KRYQNLKPIGSGA 36

  Fly   346 RGV------SLTDRT------KTPYLNAT--------------INEVQRISSILNV-NLLRILEE 383
            :|:      ::.||.      ..|:.|.|              :|. :.|.|:||| ...:.|||
Human    37 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-KNIISLLNVFTPQKTLEE 100

  Fly   384 --DAVIDGHPVPAGTAFTTQLALLHTDEETFKN------------------HKEFIPERFLENNN 428
              |..:....:.|......|:.|   |.|....                  |::..|...:..::
Human   101 FQDVYLVMELMDANLCQVIQMEL---DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

  Fly   429 LEKRLIPFGIGK 440
            ...:::.||:.:
Human   163 CTLKILDFGLAR 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587
OLIG3NP_786923.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 20/98 (20%)
bHLH_TS_OLIG3 69..149 CDD:381511 15/83 (18%)
Blue background indicates that the domain is not in the aligned region.

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