DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and LOC1278135

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_317677.4 Gene:LOC1278135 / 1278135 VectorBaseID:AGAMI1_006924 Length:310 Species:Anopheles gambiae


Alignment Length:131 Identity:39/131 - (29%)
Similarity:59/131 - (45%) Gaps:36/131 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QHQLIAPK------IPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQL----PSVARR 88
            ||..||..      :|:..:: .:...|..|:|.|..|...          |:.:    |.|.::
Mosquito   198 QHHPIAGSYYNPYTVPIARNR-ASPTHSSSSSVSPTPSQSS----------GQSVVVVQPEVVKK 251

  Fly    89 -----NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDM 148
                 |||||.|:..:|:.|..||.     ||.||     |:.:||||.:||::|..||..|.::
Mosquito   252 RRLAANARERRRMNSLNDAFDRLRD-----VVPSL-----GNDRKLSKFETLQMAQTYIAALNEL 306

  Fly   149 L 149
            |
Mosquito   307 L 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 20/54 (37%)
LOC1278135XP_317677.4 None

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