Protein Alignment l(1)sc and Neurod4

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_031527.1
• Gene: Neurod4 / 11923
• MGIID: 108055
• Length: 330
• Species: Mus musculus
• Alignment Length: 271
• Identity: 64/271 - (23%)
• Similarity: 100/271 - (36%)
• Gaps: 83/271 - (30%)

  Fly    15 QLTNSNIFL---LQHQHHHQTQQHQLIAPKIP-----LGT-----SQLQNMQQSQQSNVGPMLSS 66
            :|.|:..::   |..|:..:.|:.:      |     |||     ..::..::.::....|....
Mouse    13 ELVNTQSWMDKGLSSQNEMKEQERR------PGSYGMLGTLTEEHDSIEEDEEEEEDGDKPKRRG 71

  Fly    67 QKKKFNYNNMPYGEQLPSVARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKK 128
            .|||    .|.........|||   |||||.|:..:|:...|||:.:|          ....::|
Mouse    72 PKKK----KMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMP----------CYSKTQK 122

  Fly   129 LSKVDTLRIAVEYI---------------RGLQDMLDDGTASSTRHI---------YNSADESSN 169
            |||::|||:|..||               :|..:||..|.:..|.::         .::..|...
Mouse   123 LSKIETLRLARNYIWALSEVLETGQTLEGKGFVEMLCKGLSQPTSNLVAGCLQLGPQSTLLEKHE 187

  Fly   170 DGSSYNDYNDSLDSSQQFLTGATQSAQSHSYHSAS-PTPSYSGSEISGGGYIKQELQEQDLKFDS 233
            :.||..|              :|.|..|.:|.|.. |:|.|...|       ...|..:...|.|
Mouse   188 EKSSICD--------------STISVHSFNYQSPGLPSPPYGHME-------THSLHLKPQPFKS 231

  Fly   234 F-DSFSDEQPD 243
            . |||....||
Mouse   232 LGDSFGSHPPD 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/69 (25%)
Neurod4	NP_031527.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	23..80		12/66 (18%)
		bHLH_TS_NeuroD4_ATOH3	59..145	CDD:381564	29/99 (29%)
		Neuro_bHLH	146..263	CDD:463621	26/118 (22%)