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Protein Alignment l(1)sc and ascl2
DIOPT Version :9
Sequence 1: | NP_476623.1 |
Gene: | l(1)sc / 30983 |
FlyBaseID: | FBgn0002561 |
Length: | 257 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002940290.3 |
Gene: | ascl2 / 100494131 |
XenbaseID: | XB-GENE-6458615 |
Length: | 236 |
Species: | Xenopus tropicalis |
Alignment Length: | 175 |
Identity: | 60/175 - (34%) |
Similarity: | 83/175 - (47%) |
Gaps: | 37/175 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 PKIPLG--TSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPY-------GEQLPSV-------ARR 88
|.:|:. :|.::....|::....| :|..|.:..|. ...||:. .||
Frog 57 PVVPVAPPSSAMEEQPGSERPAKAP-----RKVANQSGSPQRLRCQRRSGSLPNAIGISATSERR 116
Fly 89 NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGT 153
|.|||||||.||.||..||||:|| .:|.:||:|||:|||.||||||.||.:|.:.|
Frog 117 NERERNRVKLVNLGFAKLRQHVPQ---------AQGPNKKMSKVETLRSAVEYIRALQSILMERT 172
Fly 154 ASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLT-GATQSAQS 197
|. .....:.:||.|....:.|:||....|: |:..|..|
Frog 173 AG------EGQGRAGSDGLSPCGSSCSVDSGSLALSPGSCSSCAS 211
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
72 |
1.000 |
Domainoid score |
I9148 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
91 |
1.000 |
Inparanoid score |
I4952 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1131543at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001993 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm9527 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13935 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3926 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 8.100 |
|
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