Protein Alignment l(1)sc and atoh1

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: XP_004911142.1
• Gene: atoh1 / 100488309
• XenbaseID: XB-GENE-6452084
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 140
• Identity: 44/140 - (31%)
• Similarity: 62/140 - (44%)
• Gaps: 21/140 - (15%)

  Fly    77 PYGEQLPSVARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEY 141
            |.|.|.......|||||.|:..:|:.|..||..:|     |.:|     .|||||.:||::|..|
 Frog   101 PGGVQKQRRLAANARERRRMHGLNHAFDQLRNVIP-----SFNN-----DKKLSKYETLQMAQIY 155

  Fly   142 IRGLQDMLD------DGTASSTRHIYNSAD----ESSNDGSSYNDYNDSLDSSQQFLTGATQSAQ 196
            |..|.|:|.      |.....|..:::..:    :|::......|:......|.||..||..|.:
 Frog   156 INALSDLLQAPPDTRDPPCPPTYQLHSGGEPRLAQSASCRRFSGDFPGQSPLSFQFQEGAGLSQK 220

  Fly   197 SH-SYHSASP 205
            .. |..||||
 Frog   221 GMVSASSASP 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	20/54 (37%)
atoh1	XP_004911142.1	bHLH_TS_ATOH1	103..166	CDD:381556	28/72 (39%)