DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and lyl1

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_068077959.2 Gene:lyl1 / 100333113 ZFINID:ZDB-GENE-090807-1 Length:321 Species:Danio rerio


Alignment Length:224 Identity:57/224 - (25%)
Similarity:87/224 - (38%) Gaps:64/224 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 APKIPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNN--------MP---YG-------EQLPS- 84
            ||..|.|.::|:..|.|..:...|..:.....|...:        ||   :|       ::.|| 
Zfish   115 APPPPHGPAELRLAQLSCLTGSSPAAALLPPAFLQTHPFISSSFLMPPAGFGIFSNARMKRRPST 179

  Fly    85 --------------VARR---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKV 132
                          :|||   |:|||.|.:.||..|..||:.:|.          ....:||||.
Zfish   180 HFEVEIRSDGPPQKLARRVFTNSRERWRQQNVNGAFSELRKLIPT----------HPPDRKLSKN 234

  Fly   133 DTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESSNDGSSYNDYNDSL----DSSQQFLTGATQ 193
            :.||:|::||..|:.:|:|         .:..:|:.....::.....||    .||.....|.|.
Zfish   235 EILRLAMKYIDFLEQLLND---------QSQPEETGQHAHAHTPSTHSLLLLTASSGSSCYGDTD 290

  Fly   194 SAQSHSYHSASPTPSYSGSEI-----SGG 217
            |.:|....:.|..|.:||..|     |||
Zfish   291 SEESTGPRACSTDPKHSGEPILALTVSGG 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 17/54 (31%)
lyl1XP_068077959.2 None

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