Protein Alignment l(1)sc and msc

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001096235.1
• Gene: msc / 100124790
• XenbaseID: XB-GENE-978233
• Length: 180
• Species: Xenopus tropicalis
• Alignment Length: 143
• Identity: 40/143 - (27%)
• Similarity: 68/143 - (47%)
• Gaps: 26/143 - (18%)

  Fly    36 QLIAPKIP-LGTSQL----QNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARR------- 88
            ||..||.. .|||:|    .:.:.|::..:....|.::|:.:..:....::.||.:.:
 Frog    19 QLPYPKAKRAGTSELLMLDHSAENSEEEGITEPSSGKRKRISRGSQSPDKKQPSRSSKDCKQSQR 83

  Fly    89 ---NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDML- 149
               |||||.|::.::..|..|:..||....::          ||||:||||:|..||..|:.:|
 Frog    84 HAANARERARMRVLSKAFSRLKTSLPWVPPDT----------KLSKLDTLRLASSYIAHLRQLLQ 138

  Fly   150 DDGTASSTRHIYN 162
            :|...:|..|..|
 Frog   139 EDRYENSYVHPVN 151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)
msc	NP_001096235.1	bHLH_SF	79..144	CDD:469605	24/74 (32%)