Protein Alignment l(1)sc and mespab

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001252512.1
• Gene: mespab / 100006128
• ZFINID: ZDB-GENE-090817-2
• Length: 240
• Species: Danio rerio
• Alignment Length: 194
• Identity: 42/194 - (21%)
• Similarity: 76/194 - (39%)
• Gaps: 46/194 - (23%)

  Fly    54 QSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARRNA--RERNRVKQVNNGFVNLRQHLPQTVVN 116
            |:::..:...:.|:::..:.|        |.:.|::|  ||:.|::.:.....:||..||.:|.
Zfish    67 QAKKLKLALPVDSKRRSRSKN--------PGMKRQSASEREKLRMRDLTKALHHLRSFLPPSVA- 122

  Fly   117 SLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYN---SADESSNDGSSYNDYN 178
                   .:.:.|:|::|||:|:.||..|.|.|......:    |.   ||:.|....|.....|
Zfish   123 -------PAGQTLTKIETLRLAISYISHLSDQLRQAEVPN----YEMCCSAEASDRFQSGLVFEN 176

  Fly   179 DSLDSSQQFLTGATQSAQSHSYHSASPT-PSYSGSEISGGGYIKQELQEQDLKFDSFDSFSDEQ 241
            ..:|..|..:....|..         || .|:..|.           ::.:..|.:...|.|.|
Zfish   177 VCMDGQQGLMQDNVQYC---------PTLTSFGDSR-----------EQMENSFPATSHFRDAQ 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	16/54 (30%)
mespab	NP_001252512.1	bHLH_TS_Mesp	91..155	CDD:381508	21/71 (30%)